I've got the same problem on my 2006 V8. No clear coat on my drivers side wheel well and now the hood is starting to peel. The dealership, Bert Smith, blamed me for repainting the car improperly. When I did some investigating, another local dealership said this was normal for cars which were damaged during shipping and reprinted at the port before being sent to the dealer. They explained that if I had brought it to them first, threw would have resprayed it, no questions asked. Since I complained all the way up to VWOA and they denied my warranty claim, the second dealership said they weren't allowed to touch it. This started before the warranty ran up and I still got nowhere.
I guess I'll have to wait for the class action...